Detail

Keywords

Gene Regulatory Networks; Microbial Interactions

Research group(s)

• Infection Biology Research Lab
  Head: Sylvia Knapp
  Research Area: Endogenous modulators of inflammation; Macrophage plasticity in bacterial lung infections; Co- and Super-Infection
  Members:
  Stefanie Widder
  Philipp Starkl
  Sylvia Knapp

Grants

• CF microbiome for biomarker detection (2017)
  Source of Funding: FWF (Austrian Science Fund), Elise Richter
  Principal Investigator

Selected publications

1. Faust, K. et al., 2018. Signatures of ecological processes in microbial community time series. Microbiome, 6(1). Available at: http://dx.doi.org/10.1186/s40168-018-0496-2.
2. Quinn, R.A. et al., 2016. Ecological networking of cystic fibrosis lung infections. npj Biofilms and Microbiomes, 2(1). Available at: http://dx.doi.org/10.1038/s41522-016-0002-1.
3. Widder, S. et al., 2016. Challenges in microbial ecology: building predictive understanding of community function and dynamics. The ISME Journal, 10(11), pp.2557-2568. Available at: http://dx.doi.org/10.1038/ismej.2016.45.
4. Arendt, D. et al., 2016. The origin and evolution of cell types. Nature Reviews Genetics, 17(12), pp.744-757. Available at: http://dx.doi.org/10.1038/nrg.2016.127.
5. Berry, D. & Widder, S., 2014. Deciphering microbial interactions and detecting keystone species with co-occurrence networks. Frontiers in Microbiology, 5. Available at: http://dx.doi.org/10.3389/fmicb.2014.00219.