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Stefanie Widder
Ap.-Prof. Stefanie Widder, PhD, Priv. Doz.

Department of Medicine I
Position: Associate Professor

ORCID: 0000-0003-0733-5666
T +43 1 40400 51390

Further Information


Gene Regulatory Networks; Microbial Interactions

Research group(s)


Selected publications

  1. Delogu, F. et al. (2023) ‘Forecasting the dynamics of a complex microbial community using integrated meta-omics’, Nature Ecology & Evolution. Available at: Available at:
  2. Widder, S. et al. (2022) ‘Metagenomic sequencing reveals time, host, and body compartment-specific viral dynamics after lung transplantation’, Microbiome, 10(1). Available at: Available at:
  3. Widder, S. et al. (2021) ‘Association of bacterial community types, functional microbial processes and lung disease in cystic fibrosis airways’, The ISME Journal, 16(4), pp. 905–914. Available at: Available at:
  4. Widder, S. et al. (2016) ‘Challenges in microbial ecology: building predictive understanding of community function and dynamics’, The ISME Journal, 10(11), pp. 2557–2568. Available at: Available at:
  5. Berry, D. & Widder, S., 2014. Deciphering microbial interactions and detecting keystone species with co-occurrence networks. Frontiers in Microbiology, 5. Available at: